BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020B03LP1|AL427568
(1045 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1296 2023 0.0
>3x_Contig1296
Length = 7334
Score = 2023 bits (1019), Expect = 0.0
Identities = 1040/1045 (99%), Gaps = 2/1045 (0%)
Strand = Plus / Minus
Query: 1 gatcacaatgcgagtatcg-attggtgatctatattcccagtttttaacctgacgtttgg 59
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1600 gatcacaatgcgagtttcgcattggtgatctatattcccagtttttaacctgacgtttgg 1541
Query: 60 taatacttaatgacaaaacagtaaaccataattccttaccagtagtaaccggtagcaaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1540 taatacttaatgacaaaacagtaaaccataattccttaccagtagtaaccggtagcaaag 1481
Query: 120 cgtntttgtttcccaagctttgttggcatgtgccctatagcttgtttacaccgttacgaa 179
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1480 cgt-tttgtttcccaagctttgttggcatgtgccctatagcttgtttacaccgttacgaa 1422
Query: 180 ttgaagcaaactggcaactgctcatctatagggaaagatacacggagataatgggtgcga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 ttgaagcaaactggcaactgctcatctatagggaaagatacacggagataatgggtgcga 1362
Query: 240 ccggcagtgaacatgcaagaggaaaaactatgataaataaagtggggctctaacgaagcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 ccggcagtgaacatgcaagaggaaaaactatgataaataaagtggggctctaacgaagcc 1302
Query: 300 ccactcttatttttcattacctctactcttacggttattccttgcaagaaactccagacg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 ccactcttatttttcattacctctactcttacggttattccttgcaagaaactccagacg 1242
Query: 360 gaggccccctcaaaattccaaagtaatgaggggcagaagtgggaaacctagcacaaaaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 gaggccccctcaaaattccaaagtaatgaggggcagaagtgggaaacctagcacaaaaac 1182
Query: 420 agaaggagcaaaaaaaaaaagaaaaaccgatttttgcccctcaccgattaattcttcctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 agaaggagcaaaaaaaaaaagaaaaaccgatttttgcccctcaccgattaattcttcctt 1122
Query: 480 tttcaacagtaaaagataaacttcctagaaatgcagcagtgaggccaggaacgaaatacc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 tttcaacagtaaaagataaacttcctagaaatgcagcagtgaggccaggaacgaaatacc 1062
Query: 540 aactgcccgtactgttctgcgtgcgaaaccttcttttaacattcattcctcgaactaggc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 aactgcccgtactgttctgcgtgcgaaaccttcttttaacattcattcctcgaactaggc 1002
Query: 600 aattgatgacatatgccagtccaaagatagaaatagcacttaaagcagagaggggagcca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 aattgatgacatatgccagtccaaagatagaaatagcacttaaagcagagaggggagcca 942
Query: 660 agggtgtctgctaggaacagaagctcgaagagtgtcaagaaaagaggtaccctcaagacg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 agggtgtctgctaggaacagaagctcgaagagtgtcaagaaaagaggtaccctcaagacg 882
Query: 720 ggttctatatcgctttctaagggtatcacatagttaggcacggtttgtaagatattcggt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ggttctatatcgctttctaagggtatcacatagttaggcacggtttgtaagatattcggt 822
Query: 780 ttgtacgaaaagaaattaactgaaatagccagtgatgttcttacagtcccgaacacgcag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ttgtacgaaaagaaattaactgaaatagccagtgatgttcttacagtcccgaacacgcag 762
Query: 840 tttagagaaggtcatccaaaggttctgacatattaccaatggaacggaasgttttcgtaa 899
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 761 tttagagaaggtcatccaaaggttctgacatattaccaatggaacggaacggtttcgtaa 702
Query: 900 tgggccccaccgaccctgtatctttgcccctcacttttcacatttctgttggcatttctc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tgggccccaccgaccctgtatctttgcccctcacttttcacatttctgttggcatttctc 642
Query: 960 gaggggttcaaaagaaatccagcttttttaaactttcttagacgtggacggacgttataa 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gaggggttcaaaagaaatccagcttttttaaactttcttagacgtggacggacgttataa 582
Query: 1020 tcaataactacttgtttatgtagcg 1044
|||||||||||||||||||||||||
Sbjct: 581 tcaataactacttgtttatgtagcg 557
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,267
Number of Sequences: 1807
Number of extensions: 12267
Number of successful extensions: 153
Number of sequences better than 1.0e-20: 1
length of query: 1045
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1029
effective length of database: 10,329,639
effective search space: 10629198531
effective search space used: 10629198531
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)